Neandertal ancestry through time: Insights from genomes of ancient and present-day humans

Bibliographic Collection: 
Publication Type: Journal Article
Authors: Iasi, Leonardo N. M.; Chintalapati, Manjusha; Skov, Laurits; Mesa, Alba Bossoms; Hajdinjak, Mateja; Peter, Benjamin M.; Moorjani, Priya
Year of Publication: 2024
Journal: bioRxiv
Pagination: 2024.05.13.593955
Date Published: 2024/01/01
Publication Language: eng

Gene flow from Neandertals has shaped the landscape of genetic and phenotypic variation in modern humans. We identify the location and size of introgressed Neandertal ancestry segments in more than 300 genomes spanning the last 50,000 years. We study how Neandertal ancestry is shared among individuals to infer the time and duration of the Neandertal gene flow. We find the correlation of Neandertal segment locations across individuals and their divergence to sequenced Neandertals, both support a model of single major Neandertal gene flow. Our catalog of introgressed segments through time confirms that most natural selection–positive and negative–on Neandertal ancestry variants occurred immediately after the gene flow, and provides new insights into how the contact with Neandertals shaped human origins and adaptation.Competing Interest StatementThe authors have declared no competing interest.