CARTA Glossary
| Word | Definition | Related Vocabulary |
|---|---|---|
| Prokaryotes |
Unicellular organisms that lack a membrane-bound nucleus, mitochondria, or any other membrane-bound organelle. This definition is now debated as some “prokaryotes,” such as archaea (“extremophiles”), are more closely related to eukaryotes. |
Eukaryotes |
| Protease inhibitor |
A substance that blocks or reduces the activity of proteases, enzymes that break down proteins into smaller peptides and amino acids. Protease inhibitors occur naturally in many plants, particularly legumes and grains, where they may help protect the plant against herbivores and pathogens. When consumed, some protease inhibitors can interfere with protein digestion and nutrient absorption; cooking can substantially reduce their activity. |
Amino acids |
| Protein |
One of the four classes of major biomolecules. Proteins are molecules encoded by DNA sequences and composed of amino acids connected by peptide bonds. These range in size from a few amino acids (short peptides) to large molecules (long polypeptides) comprised of thousands of amino acids. |
Amino acids, DNA sequence, Molecule, Peptide bond |
| Proteome |
The complete set of proteins produced by a cell, tissue, organism, or biological system at a given time and under specific conditions. Unlike the genome, which is relatively stable, the proteome can change in response to development, environment, diet, disease, and other factors. |
Genome, Protein |
| Regulatory elements |
Binding sites on chromosomes for transcription factors, which are involved in gene regulation. |
Chromosome, Gene, Transcription factors |
| Ribonucleic acid (RNA) |
A molecule essential in gene coding, decoding, regulation, and expression. RNA consists of sequences of the four nucleotide bases: Adenine, Uracil, Guanine, and Cytosine. Types of RNA include messenger RNA (mRNA), transfer RNA (tRNA), ribosomal RNA (rRNA), small nuclear RNA (snRNA), and other non-coding RNAs. Some viruses including Influenza A and SARS-CoV-2 have RNA genomes. |
Gene, Genome, Influenza, Molecule, Nucleotides, Sequence, Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), Virus |
| Saliva |
A complex exocrine fluid mainly produced by the parotid, submandibular, and sublingual salivary glands, as well as to a lesser degree by the multiple minor salivary glands lining the oral cavity. Whole mouth saliva also contains plasma exudates, cellular debris, and food remnants. The components of saliva play important roles in the dietary preprocessing of food, the lubrication of the mouth, the protection and remineralization of teeth, and in host defense. |
|
| Salivary proteins |
Proteins and glycoproteins secreted primarily by the salivary glands that perform a range of functions in the mouth, including lubricating and protecting oral tissues, initiating digestion, binding and transporting molecules, maintaining tooth mineral balance, and contributing to antimicrobial defense. Some salivary proteins also interact with dietary compounds and influence taste and the perception and processing of food. |
Glycoprotein, Protein |
| Sequence |
The linear order of the nucleotide building blocks, which encodes individual form and function. |
Nucleotides |
| Short-chain fatty acids (SCFAs) | Carboxylic acids (principally acetate, propionate, and butyrate) produced by microbial fermentation of dietary fiber in the colon; serve as energy substrates for colonocytes and contribute to systemic metabolism. | |
| Sialic acids |
A family of acidic sugars with a nine-carbon backbone. They are found at the outermost fringes of the sugar chains (glycans) that cover all vertebrate cells. The two most common sialic acids in mammals are N-acetylneuraminic acid (Neu5Ac) and N-glycolylneuraminic acid (Neu5Gc). |
Glycans, N-acetylneuraminic acid (Neu5Ac), N-glycolylneuraminic acid (Neu5Gc) |
| Species |
A population whose individuals can mate with one another to produce viable and fertile offspring. This is a debated definition and the concept is problematic for extinct fossil organisms for which DNA is not available. This definition is problematic in regard to bacteria as they can exchange genetic material across widely separate taxa. |
Bacteria, Deoxyribonucleic acid (DNA) |
| Stable Isotopes |
Versions of a chemical elements that differ slightly in mass due to different numbers of neutrons in atoms. They differ from radioactive isotopes in that they don’t decay into other elements or give off radiation; they simply stay as they are indefinitely. These isotopes are found in biological material, including fossils, and can be used to study paleo-diet and ecology. |
|
| Starch |
A plant storage molecule in the form of a polysaccharide. Starch is obtained chiefly from cereals, tubers, and potatoes. It is an important constituent of the human diet due to its digestibility, unlike many other polysaccharides, such as plant cellulose, pectins, and xylans (polyxylose). |
|
| Symbiont |
An organism that lives in a symbiosis providing benefits to its host. |
Host, Symbiosis |
| Tannins |
A diverse group of naturally occurring plant polyphenols that can bind to proteins and certain minerals, potentially reducing their digestion or absorption. They are found in foods such as tea, coffee, legumes, nuts, fruits, and whole grains and contribute to the astringent or drying sensation of some foods. In nutrition, tannins are sometimes considered antinutritional compounds, although their effects depend on the type and amount consumed and they may also have beneficial antioxidant and other biological effects. |
|
| Trace element |
An essential mineral required by the body in very small amounts, generally less than about 100 mg per day. Trace elements support essential biological processes including enzyme activity, metabolism, hormone production, immune function, and antioxidant defense. Examples include iron, zinc, copper, iodine, selenium, manganese, and molybdenum. |
|
| Type 2 Diabetes (adult on-set) |
A chronic metabolic disorder that affects the way the body processes blood sugar (glucose). It is characterized by high blood sugar, insulin resistance, and relative lack of insulin and primarily occurs as a result of obesity and lack of exercise. |
Obesity |
| Vaginal Microbiome |
The totality of all organisms (microbes) that colonize the vagina. |
|
| Virus |
A submicroscopic infectious agent 10 million times smaller than a human that relies on a living host cell for metabolic processes and replication. Like living organisms, viruses possess genes and evolve by natural selection. Unlike living organisms, viruses lack cellular structure, do not have their own metabolism, instead relying on a living host cell for production of materials, and replication through self-assembly inside a host cell. |
Gene, Host, Infectious disease |
| White blood cells (WBCs) |
A type of immune cell involved in protecting the body against infectious disease and foreign invaders. WBCs are also called leukocytes. |
Immune system, Infectious disease |

