CARTA Glossary
| Word | Definition | Related Vocabulary |
|---|---|---|
| Phenotype |
Observable traits of an organism that result from interactions between genes and environment during development. |
Gene |
| Phosphorylation |
A biochemical process in which a phosphate group (PO4 ³-) is added to a molecule, typically a protein, by an enzyme called a kinase. This addition of a phosphate group often occurs at specific amino acids in the protein, such as serine, threonine, or tyrosine, and it can significantly change the protein’s structure, function, or activity. Phosphorylation is a crucial mechanism of cellular regulation and plays a key role in controlling various cellular processes and also histone modification. |
Amino acids, Histones, Protein |
| Polymorphism |
The “many forms,” or genetic variants, of a single gene that exist and are maintained in a population at a frequency of 1% or higher. |
Gene, Variant |
| Polysaccharide |
A large, complex carbohydrate made up of many monosaccharides (simple sugars) linked together by glycosidic bonds. |
Glycosidic bond, Monosaccharide |
| Pontic-Caspian steppe |
A vast grassland region in Eastern Europe and Western Asia, stretching from the northern shores of the Black Sea (Pontic) to the Caspian Sea. It forms the western part of the Eurasian Steppe and has played a crucial role in human migration, culture, and prehistoric population dynamics. |
Eurasian Steppe |
| Prokaryotes |
Unicellular organisms that lack a membrane-bound nucleus, mitochondria, or any other membrane-bound organelle. This definition is now debated as some “prokaryotes,” such as archaea (“extremophiles”), are more closely related to eukaryotes. |
Eukaryotes |
| Protein |
One of the four classes of major biomolecules. Proteins are molecules encoded by DNA sequences and composed of amino acids connected by peptide bonds. These range in size from a few amino acids (short peptides) to large molecules (long polypeptides) comprised of thousands of amino acids. |
Amino acids, DNA sequence, Molecule, Peptide bond |
| Regulatory elements |
Binding sites on chromosomes for transcription factors, which are involved in gene regulation. |
Gene, Transcription factors |
| Ribonucleic acid (RNA) |
A molecule essential in gene coding, decoding, regulation, and expression. RNA consists of sequences of the four nucleotide bases: Adenine, Uracil, Guanine, and Cytosine. Types of RNA include messenger RNA (mRNA), transfer RNA (tRNA), ribosomal RNA (rRNA), small nuclear RNA (snRNA), and other non-coding RNAs. Some viruses including Influenza A and SARS-CoV-2 have RNA genomes. |
Gene, Genome, Influenza, Molecule, Nucleotides, Sequence, Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), Virus |
| Selection |
Allele frequency change over time caused by the different replication rate of specific alleles. |
Allele |
| Sequence |
The linear order of the nucleotide building blocks, which encodes individual form and function. |
Nucleotides |
| Species |
A population whose individuals can mate with one another to produce viable and fertile offspring. This is a debated definition and the concept is problematic for extinct fossil organisms for which DNA is not available. This definition is problematic in regard to bacteria as they can exchange genetic material across widely separate taxa. |
Bacteria, Deoxyribonucleic acid (DNA) |
| Sumoylation |
A post-translational modification in which a small protein called SUMO (Small Ubiquitin-like Modifier) is covalently attached to a target protein. This process is similar to ubiquitylation, but instead of marking proteins for degradation, sumoylation typically regulates the function, stability, or localization of target proteins. |
Protein, Ubiquitylation |
| Symbiont |
An organism that lives in a symbiosis providing benefits to its host. |
Host, Symbiosis |
| Symbiosis |
A close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or parasitic. |
Parasitism |
| Transcription |
The first step in gene expression during which the nucleotide sequence of DNA is transcribed into an RNA molecule that can ultimately be translated into protein. |
Deoxyribonucleic acid (DNA), Gene expression, Molecule, Nucleotides, Protein, Ribonucleic acid (RNA), Sequence |
| Transcription factors |
Proteins that initiate and regulate the transcription of genes. Transcription factors bind to specific sequences of DNA called regulatory elements, or other proteins that do so, and directly or indirectly affect the initiation of transcription. The activities of transcription factors determine where and when genes are expressed. |
Deoxyribonucleic acid (DNA), Gene, Protein, Regulatory elements, Transcription |
| Transmissible (Disease) |
Illnesses that are transmitted from one host to another though direct or indirect contact, via a vector or contaminated food and water. Synonymous with communicable and infectious. |
Communicable (disease), Host, Infectious disease, Vector (Epidemiology) |
| Ubiquitylation |
A biochemical process in which a small protein called ubiquitin is attached to a target protein. This attachment typically occurs on the lysine residues of the target protein and is facilitated by a series of enzymes known as the ubiquitin-proteasome system. Ubiquitylation serves as a signal for several key cellular processes. |
Protein |
| Variant |
DNA that differs among groups studied. |
Deoxyribonucleic acid (DNA) |
| Vector (Epidemiology) |
Any agent which carries and transmits an infectious pathogen to another living organism. Most agents that act as vectors are living organisms. |
|
| Virus |
A submicroscopic infectious agent 10 million times smaller than a human that relies on a living host cell for metabolic processes and replication. Like living organisms, viruses possess genes and evolve by natural selection. Unlike living organisms, viruses lack cellular structure, do not have their own metabolism, instead relying on a living host cell for production of materials, and replication through self-assembly inside a host cell. |
Gene, Host, Infectious disease |
| Whole-genome sequencing |
A technique that determines the complete DNA sequence of an organism’s genome at a single time. |
DNA sequence, Genome |
| Y-Chromosome DNA (yDNA) |
One of the two allosomes of the mammalian genome that determine sex. The Y-chromosome can only be inherited paternally. |
Allosomes, Genome |
| Yamnaya culture |
A late Copper Age to Early Bronze Age (C. 3300-2600 BCE) pastoralist culture of the Pontic-Caspian steppe, in what is now southern Russia and Ukraine. It is considered one of the key ancestral populations of Modern Europeans and Central Asians due to its role in large-scale migrations during the Bronze Age. |
Pastoralist, Pontic-Caspian steppe |

